Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887017.1_cds_XP_016441276.1_36653
CDS Infomation

[gene=LOC107766901] [db_xref=GeneID:107766901] [protein=probable pectinesterase/pectinesterase inhibitor 13] [protein_id=XP_016441276.1] [location=join(45013..46142,46235..46389,46868..47565)] [gbkey=CDS]
Sequence

ATGGCGTTTCAAGATTTTGATCAAATTTCAGAGCGAAGAAAGCTCGAAAGGCAGCAAAAG
ATGAAGAGAAGGATCATGATCGCTGTCGTATTACTTCTCCTCATCCTCGCCGCGGTTGCT
GCTGCTGTTGTCTATCTTGTTGTGTTCAAAAACAAGAGCGAGGACGCCTCCGCCAACAAA
TCTAATAAGAATGCTTCGACGCCCCCTTCAAAAGAACCAGAAACCCTTAAAAGTGATGCA
ACACCACCTCCTAAGGATGACGCAGCATCAACACCTCCTAAGGTTGCAGCACCGCCCCCT
GATGACGGTGCTGTCCCTCCACCAAAGGAAGAAGGTGCTGCAGTACCGCCAGTCAAAGAT
GCTGCAGCCCCTTCACCACCATCTGACAATGCTCCTGCACTGTCACCACAAGAGGGTGAC
AATGCAGCAGCACCCGCCCTTTCACCGCAAGCTGAAGGAGCTATAGGAGCAATATGTGCA
GCCACGGAATTCAATCAAACGTGCGGGGACATTCTATCAAAAGTTTTACAAACCAATGCC
TCCGGGGCTCAACCCGCGGATCTTCTCAAGGCAACCATCTCTGCAGCTATTGATGAGATT
GCAAAGGGCATTGATGAACTAGGCAAAATCAACAAGGATTCTCCAGAGAAATCGACAGCC
TATGACGATTGTATGTCCCTACTTGCTGATGCCAAAAAGGACTTGAACAGTTCTATTTAC
ATTCTCGATGGCGGCATTAATGATGTCGCCTCAGCAACAGCTGAACTCAACAACAAGTTA
AGTGCAGCTTTAACATACCAAGACATGTGTGTGGACGGATACCCTGAAGCAGACCAGTCC
ACGGTACAAACTGCCTTGAAGAAAATAGGGGAACATACCATCAATTCTCTGGCTGTTGCG
TCCGAATTGTCAACAACATCTCCAAAGACAAATAATAATGCTAAAAGACGTCTTCTAACA
ACACGATTAGGCGTTCCCACATGGATGAATCAAGGTGATCGTAGAATGTTGGAAGAAGAA
GAAGGTAAAGATCCAAAGGGTATTGCAAACGCCACTGTTGCAAAAGATGGTAGTGGTGAT
TTTACTACCATAAATGATGCTCTAAAGGCGGTTCCAAGCTTTGAAGGAAGGTACTTTATT
TATGTGAAAGGAGGAGTTTATGAAGAGAATGTAGTTGTGTCACAAGCCAATCTTACATTT
TTTGGAGACGGATCCCAAAAGAGTATTATTACCGGGAGCAAAAACATTGTGGATGATCTG
TCAACATACCAAAGTGCAACAGTTGTTATTTCAGGGAATGGATTTTTTGCATATAAGATA
GGATTCCGAAACACAGCGGGTCCAGAAAAGTTACAAGCAGTGGCACTCCGCGTCCAAGCT
GATCACACAATATTTGTGAATTGTCGCATGGAGGGTTACCAAAGCGTGATCCACGCTGCA
ACCCATCGACAATTCTATCGCGGCTGTTACATTACAGGCACGGTTGACATTATCTCGGGC
AACGCTGCTGCTGTATTCCAGAATTGCCAATTTTACCTAAGGAAACCACTGGATGACCAA
AAGAACGTCATTACTGCTCAAGGAAGGTCGAACAAGCGTCAAACCACAGGGACCGTCTTG
CAAACGTGTGGCATTTTCGCGGACGATAAGCTTGAGCCTGAAAAATCGAAGGTTAAGAGT
TACTTGGGTCGACCAATGAAGGAATATTCGAGGACGGTTGTAATGGAGACGGACATTACT
GATGTGATTGACCCTGAAGGATGGGTAGCCTCGAACGGGGATTATGCGTTAAGCACCCTG
TATTTTGCAGAGTACAGTAACAAAGGCGCTGGATCTGAAGTCGCCTCTAGAGTCAAGTGG
CCTGGATATCAAGGGGCGATAGGCAAAGATGCTGCCCAGAATTACACAGTTGAATCCTTG
TTACAAGGACAAACTTGGTTGAAGGATTATGATGTTCAAGTCCGTTTTGGCCTTTCCAAC
TGA

Peptide Sequence

PEP ID

XP_016441276.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 13 [Nicotiana tabacum]
Sequence

MAFQDFDQISERRKLERQQKMKRRIMIAVVLLLLILAAVAAAVVYLVVFKNKSEDASANK
SNKNASTPPSKEPETLKSDATPPPKDDAASTPPKVAAPPPDDGAVPPPKEEGAAVPPVKD
AAAPSPPSDNAPALSPQEGDNAAAPALSPQAEGAIGAICAATEFNQTCGDILSKVLQTNA
SGAQPADLLKATISAAIDEIAKGIDELGKINKDSPEKSTAYDDCMSLLADAKKDLNSSIY
ILDGGINDVASATAELNNKLSAALTYQDMCVDGYPEADQSTVQTALKKIGEHTINSLAVA
SELSTTSPKTNNNAKRRLLTTRLGVPTWMNQGDRRMLEEEEGKDPKGIANATVAKDGSGD
FTTINDALKAVPSFEGRYFIYVKGGVYEENVVVSQANLTFFGDGSQKSIITGSKNIVDDL
STYQSATVVISGNGFFAYKIGFRNTAGPEKLQAVALRVQADHTIFVNCRMEGYQSVIHAA
THRQFYRGCYITGTVDIISGNAAAVFQNCQFYLRKPLDDQKNVITAQGRSNKRQTTGTVL
QTCGIFADDKLEPEKSKVKSYLGRPMKEYSRTVVMETDITDVIDPEGWVASNGDYALSTL
YFAEYSNKGAGSEVASRVKWPGYQGAIGKDAAQNYTVESLLQGQTWLKDYDVQVRFGLSN

Transcript Sequence

Gene sequence data has not been registered.